'DNA Assembly' Portlet

Viewing the job results

When your job is finished (that is when the job status changes to 'finished') you can view the results of the job. To view the results of your job click the 'view results' next to your job name on the main screen of the portlet (the 'Job list'). A new screen appears. It will contain either one or two sections. One section will be displayed if you chose to receive the final result in the psf format. Two sections will be displayed if you chose to receive the final result in any other data format.

Your job result delivered in the psf data format is available as the 'Output file for DNA Assembly task'. The DNA Assembly application always produces this file and it is always saved for your reference, even in case you chose to receive the final result in a different format. To download this file to your hard drive click the link shown in the 'Download' row.

If you chose to receive the final result of your job in a different format than psf the 'Output file for output format converter task' section will be displayed. It will contain a 'Download' link which you can use to fetch the result to your hard drive.

The results of your job can be visualized with a specially designed DNA Assembly Viewer viewer (courtesy of ACC Cyfronet AGH). The DAV viewer is prepared as a Java applet and will launch in a new window of your web browser. To visualize your result click the 'Visualize' link in the 'Output file for DNA Assembly task' section.

The results can be also viewed while browsing the job configuration. Find the DNA Assembly task form in the 'Job main menu' to view the result in the psf format. If you chose to receive the final result in a different format than psf find the output format converter subtask form. Use the 'download' buttons displayed next to the 'stdout' entries on the task forms.

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